Operational assessment questions
- At each step of the workflow, describe which software was used and why:
- Was the choice affected by the nature and/or quality of the reads?
- Was the choice made due to the time and cost of the analysis?
- What are the accuracy and performance considerations for the chosen piece of software?
- For each software, describe which input parameters were chosen, and why:
- Was the choice affected by the nature and/or quality of the reads?
- Did the available hardware play a role in the parameter choice?
- How did the purpose of the study affect the parameter choice?
- For each step of the workflow, how do you know that it completed successfully and that the results are usable for the next step?
Bibliography
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